{"id":1586,"date":"2016-01-17T19:13:44","date_gmt":"2016-01-17T19:13:44","guid":{"rendered":"http:\/\/www.brainpreservation.org\/?page_id=1586"},"modified":"2018-03-12T10:57:40","modified_gmt":"2018-03-12T10:57:40","slug":"asc_rabbit_fulleval","status":"publish","type":"page","link":"https:\/\/www.brainpreservation.org\/zh\/asc_rabbit_fulleval\/","title":{"rendered":"Aldehyde Stabilized Cryopreserved Rabbit Brain Evaluation Images"},"content":{"rendered":"
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Aldehyde Stabilized Cryopreserved Rabbit Brain Evaluation Images<\/strong><\/p>\n\n

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This page contains the detailed electron microscope images taken for evaluation of the Aldehyde-Stabilized Cryopreserved (ASC) rabbit brain (Submission #6) submitted by 21st Century Medicine (21CM) in fulfillment of the requirements for the Brain Preservation Prize. For a summary overview of the ASC procedure itself\u00a0please refer to our ASC overview page<\/a>.<\/p>\n

Witnessing of preservation procedure<\/strong><\/span><\/p>\n

\"ASC_WitnessOfProcedure_Icon\"<\/a>Kenneth Hayworth (KH) (President of the Brain Preservation Foundation (BPF)) and Michael Shermer (member of BPF advisory board) witnessed (on Sept. 25, 2015) the full Aldehyde Stabilized Cryopreservation surgical procedure performed on this rabbit at the laboratories of 21CM under the direction of 21CM lead researcher Robert McIntyre. This included the live rabbit\u2019s carotid arteries being perfused with glutaraldehyde and subsequent perfusion with cryoprotectant agent (CPA). KH witnessed this rabbit brain being put in -135o<\/sup>C storage, removal from storage the following\u00a0day\u00a0(verifying that it had vitrified solid), and KH witnessed all subsequent tissue processing steps involved in the evaluation process.<\/p>\n\n\t

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Peer-reviewed publication of procedure<\/strong><\/span><\/p>\n

\"ASC_PaperIcon\"<\/a>All details of the\u00a0preservation procedure performed on this rabbit brain have been published\u00a0in the journal Cryobiology\u00a0by Robert McIntyre and Greg Fahy in their 2015 paper “Aldehyde-stabilized Cryopreservation”. Here is a link to that open access paper:<\/p>\n

http:\/\/www.sciencedirect.com\/science\/article\/pii\/S001122401500245X<\/a><\/p>\n

This paper also describes the methods used to vibratome section the rabbit brain into coronal sections, heavy metal stain those sections, and process them for electron microscopy -the same\u00a0methods used to obtain the images seen in this evaluation page.<\/p>\n\n\t

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Link to download all evaluation FIB-SEM movies and Electron Micrographs<\/strong><\/span><\/p>\n

In order to verify that the brain ultrastructure of this Aldehyde Stabilized Cryopreserved rabbit brain was in fact well preserved required extensive electron microscope imaging\u00a0from widely spaced regions of the rabbit’s brain.\u00a0Individual links to many of these movies and images are provided on this web page.<\/p>\n

We have also put all of the 3D datasets and images into a Google Drive link: CLICK HERE FOR GOOGLE DRIVE LINK TO DATASETS AND IMAGES<\/a><\/p>\n\n\t

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Movies of intact rabbit brain<\/strong><\/span><\/p>\n

\"RabbitBrainBeingPutIntoStorage_VideoIcon\"<\/a>A movie (taken by KH) of the rabbit brain floating in fixative+CPA after being removed from skull, being put into a -135o<\/sup>C freezer storage unit.<\/p>\n

https:\/\/spaces.hightail.com\/space\/nG6KQ<\/a><\/p>\n\n\t

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\"RabbitBrainBeingTakenOutOfStorage_VideoIcon\"<\/a>A movie (taken by KH) of that same rabbit brain being taken out of the -135o<\/sup>C freezer unit after overnight storage. It is clearly visible that the brain has vitrified solid at this temperature.<\/p>\n

https:\/\/spaces.hightail.com\/space\/nG6KQ<\/a><\/p>\n\n\t

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Focused Ion Beam Scanning\u00a0Electron Microscopy (FIB-SEM) Evaluation Volumes<\/strong><\/span><\/p>\n

As part of the prize requirements we needed to evaluate whether the 3D synaptic connectivity of the rabbit brain was well preserved. To accomplish this (KH) acquired three FIB-SEM volumes from widely separated parts of a coronal vibratome section midway through the ASC rabbit brain. An overview of the FIB-SEM imaging process can be obtained in (Hayworth et al. 2015)<\/a>.<\/p>\n\n\t

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FIB-SEM volume ‘F1’ cortex:<\/strong><\/p>\n

\"ASC_RabbitBrain_EvalFigure_03\"<\/a>\"ASC_RabbitBrain_EvalFigure_04_Scaled90Percent\"<\/a>\"ASC_RabbitBrain_EvalFigure_05_Scaled90Percent\"<\/a><\/strong><\/p>\n

Link to download movie: https:\/\/spaces.hightail.com\/space\/kYOGB<\/a><\/p>\n

\"ASC_RabbitBrain_EvalFigure_06\"<\/a>\"ASC_RabbitBrain_EvalFigure_07\"<\/a>\"ASC_RabbitBrain_EvalFigure_08\"<\/a><\/p>\n

Link to download movie: https:\/\/spaces.hightail.com\/space\/kYOGB<\/a><\/p>\n\n\t

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FIB-SEM volume ‘F2’ cortex:<\/strong><\/p>\n

\"ASC_RabbitBrain_EvalFigure_09\"<\/a>\"ASC_RabbitBrain_EvalFigure_10_Scaled90Percent\"<\/a>\"ASC_RabbitBrain_EvalFigure_11_Scaled90Percent\"<\/a><\/p>\n

Link to download movie: https:\/\/spaces.hightail.com\/space\/kYOGB<\/a><\/p>\n

\"ASC_RabbitBrain_EvalFigure_12\"<\/a>\"ASC_RabbitBrain_EvalFigure_13\"<\/a>\"ASC_RabbitBrain_EvalFigure_14\"<\/a><\/p>\n

Link to download movie: https:\/\/spaces.hightail.com\/space\/kYOGB<\/a><\/p>\n\n\t

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FIB-SEM volume ‘F3’ striatum:<\/strong><\/p>\n

\"ASC_RabbitBrain_EvalFigure_15\"<\/a>\"ASC_RabbitBrain_EvalFigure_16_Scaled90Percent\"<\/a>\"ASC_RabbitBrain_EvalFigure_17_Scaled90Percent\"<\/a><\/p>\n

Link to download movie: https:\/\/spaces.hightail.com\/space\/kYOGB<\/a><\/p>\n

\"ASC_RabbitBrain_EvalFigure_18\"<\/a>\"ASC_RabbitBrain_EvalFigure_19_Scaled90Percent\"<\/a>\"ASC_RabbitBrain_EvalFigure_20_Scaled90Percent\"<\/a><\/p>\n

Link to download movie: https:\/\/spaces.hightail.com\/space\/kYOGB<\/a><\/p>\n\n\t

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2D SEM survey images<\/strong><\/span><\/p>\n

These are a subset of the 2D Scanning Electron Microscope survey images we performed on vibratome slices 4 and 6.\u00a0These include images of cortex, basal ganglia, hippocampus, and thalamus.\u00a0Additional survey images are contained in the evaluation zip file:\u00a0 https:\/\/spaces.hightail.com\/space\/QOGUe<\/a><\/p>\n

\"ASC_RabbitBrain_EvalFigure_21\"<\/a>\"ASC_RabbitBrain_EvalFigure_22\"<\/a>\"ASC_RabbitBrain_EvalFigure_23\"<\/a><\/p>\n

\"ASC_RabbitBrain_EvalFigure_24\"<\/a>\"ASC_RabbitBrain_EvalFigure_25\"<\/a>\"ASC_RabbitBrain_EvalFigure_26\"<\/a><\/p>\n

\"ASC_RabbitBrain_EvalFigure_27\"<\/a>\"ASC_RabbitBrain_EvalFigure_28\"<\/a>\"ASC_RabbitBrain_EvalFigure_29\"<\/a><\/p>\n

\"ASC_RabbitBrain_EvalFigure_30\"<\/a>\"ASC_RabbitBrain_EvalFigure_31\"<\/a>\"ASC_RabbitBrain_EvalFigure_32\"<\/a><\/p>\n

\"ASC_RabbitBrain_EvalFigure_33\"<\/a>\"ASC_RabbitBrain_EvalFigure_34\"<\/a>\"ASC_RabbitBrain_EvalFigure_34\"<\/a><\/p>\n

\"ASC_RabbitBrain_EvalFigure_35\"<\/a>\"ASC_RabbitBrain_EvalFigure_36_ScaledDownFurther\"<\/a>\"ASC_RabbitBrain_EvalFigure_37\"<\/a><\/p>\n

\"ASC_RabbitBrain_EvalFigure_38\"<\/a>\"ASC_RabbitBrain_EvalFigure_39\"<\/a>\"ASC_RabbitBrain_EvalFigure_40\"<\/a><\/p>\n

\"ASC_RabbitBrain_EvalFigure_41\"<\/a><\/p>\n\n\t

<\/div>\n<\/div>\n\n<\/div>\n\t<\/div>\n\n<\/div>","protected":false},"excerpt":{"rendered":"Aldehyde Stabilized Cryopreserved Rabbit Brain Evaluation Images This page contains the detailed electron microscope images taken for evaluation of the Aldehyde-Stabilized Cryopreserved (ASC) rabbit brain (Submission #6) submitted by 21st Century Medicine (21CM) in fulfillment of the requirements for the Brain Preservation Prize. For a summary overview of the ASC procedure itself\u00a0please refer to our [...]","protected":false},"author":6,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"coauthors":[28],"class_list":["post-1586","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/www.brainpreservation.org\/zh\/wp-json\/wp\/v2\/pages\/1586","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.brainpreservation.org\/zh\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.brainpreservation.org\/zh\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.brainpreservation.org\/zh\/wp-json\/wp\/v2\/users\/6"}],"replies":[{"embeddable":true,"href":"https:\/\/www.brainpreservation.org\/zh\/wp-json\/wp\/v2\/comments?post=1586"}],"version-history":[{"count":31,"href":"https:\/\/www.brainpreservation.org\/zh\/wp-json\/wp\/v2\/pages\/1586\/revisions"}],"predecessor-version":[{"id":2227,"href":"https:\/\/www.brainpreservation.org\/zh\/wp-json\/wp\/v2\/pages\/1586\/revisions\/2227"}],"wp:attachment":[{"href":"https:\/\/www.brainpreservation.org\/zh\/wp-json\/wp\/v2\/media?parent=1586"}],"wp:term":[{"taxonomy":"author","embeddable":true,"href":"https:\/\/www.brainpreservation.org\/zh\/wp-json\/wp\/v2\/coauthors?post=1586"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}